Konstantinos Palikaras, Assist. Professor

 

Research focus

 

The Unit of Neurogenetics and Ageing is part of the Department of Physiology (Medical School, National and Kapodistrian University of Athens; NKUA). We use the non-parasitic and soil-dwelling nematode worm Caenorhabditis elegans, to investigate the molecular mechanisms of neuronal functional and neuronal circuit formation during development, stressed conditions and ageing. C. elegans provides a unique opportunity to study synapse and neuronal circuits because the entire connectome of its 302 neurons has been reconstructed and defined. Additionally, the nematode neurons share many functional characteristics, including neurotransmitters, receptors, and neuromodulators, with higher organisms. Despite its extremely simple nervous system, C. elegans shows a wide variety of responses from a simple aversion upon mechanical stimuli, to relatively complicated behaviors, such as associative learning and memory. Notably, age-associated decline of synaptic function is evolutionarily conserved in organisms as diverse as the worm C. elegans and humans, signifying commonalities in the underlying molecular mechanisms.

 

The central aim for our research is to shed light on the molecular mechanisms underlining ageing and age-related deterioration of the nervous system. Our research focuses on mitochondrial quality control mechanisms investigating the role of energy metabolism on tissue and organismal homeostasis. Our lab has received a European Research Council (ERC) Starting Investigator Grant to investigate the role of mitophagy in synaptic plasticity and function. Moreover, our interests involve testing the effects of different natural and chemical compounds on C. elegans physiology and lifespan, developing nematode models of human neurodegenerative diseases and the development of novel genetic tools for biomedical research.

 

Personnel

Group leader

Konstantinos Palikaras (PhD; palikarask@med.uoa.gr)

Postdoctoral researchers

Fivos Borbolis (PhD; kmpormpol@med.uoa.gr

Christina Ploumi (PhD; cploumi@med.uoa.gr)

Christina Doxaki (MD, PhD; cdoxaki@icloud.com)

PhD students

Antonis Roussos (antoinerous96@gmail.com)

Eirini Mytilinaiou (mytilinaioue@med.uoa.gr)

Panagiotis Haritidis (panhari85@gmail.com)

MSc students

Katerina Kitopoulou (aikitop@med.uoa.gr)

Katerina Zacharopoulou (katezach43@gmail.com; MSc student “Molecular Biomedicine” - rotation)

Alumni

Panagiota Milioti (panmilioti@gmail.com; MSc student “Molecular Biomedicine” - rotation)

Myrsini Kteniadaki (MSc student “International Master of Neuroscience” - rotation)

Selected publications:

  1. Borbolis F, Mytilinaiou E, Palikaras K. The crosstalk between microbiome and mitochondrial homeostasis in neurodegeneration. Cells, 2023;12(3):429.
  2. Palikaras K.*, Mari M., Ploumi C., Princz A., Filippidis G., Tavernarakis N.* Age-dependent nuclear lipid droplet deposition is a cellular hallmark of aging in Caenorhabditis elegans. Aging Cell, 2023: e13788 *corresponding authors
  3. Xie C., Zhuang X., Niu Z., Ai R., Lautrup S., Zheng S., Jiang Y., Han R., SenGupta T., Cao S., Lagartos-Donate M., Cai C., Xie L., Caponio D., Wan W., Schmauck-Medina T., Zhang J., Wang H., Lou G., Xiao X., Zheng W., Palikaras K., Yang G., Caldwell K., Cladwell G., Shen H., Nilsen H., Lu J., Fang EF. Amelioration of Alzheimer’s disease pathology by mitophagy inducers identified via machine learning and cross-species workflow. Nature Biomedical Engineering, 2022
  4. Aman Y., Schmauck-Medina T., Hansen M., Morimoto RI., Simon AK., Bjedov I., Palikaras K., Simonsen A., Johansen T., Tavernarakis N., Rubinsztein DC., Patridge L., Kroemer G., Labbadia J. and Fang EF. Autophagy in healthy aging and disease. Nature Aging, 2021
  5. Palikaras K.*, Achanta K., Choi S., Akbari M.* and Bohr VA.* Alteration of mitochondrial homeostasis is an early event in a C. elegans model of human tauopathy. Aging (Albany NY), 2021 *corresponding authors
  6. Zaninello M.*, Palikaras K.*, Sotiriou A., Tavernarakis N. and Scorrano L. Sustained intracellular calcium rise mediates neuronal mitophagy in models of autosomal dominant optic atrophy. Cell Death and Differentiation, 2021 *equal contribution
  7. SenGupta T.*, Palikaras K.*, Esbensen Y.Q., Konstantinidis G., Galindo FJN., Achanta K., Kassahun H., Stavgiannoudaki I., Bohr VA., Akbar M., Gaare J., Tzoulis C., Tavernarakis N. and Nilsen H. Base excision repair causes age-depedent accumulation of single-stranded DNA breaks that contribute to Parkinson disease pathology. Cell Reports, 2021*equal contribution
  8. Zaninello M., Palikaras K., Naon D., Iwata K., Herkenne S., Quintana-Cabrera R., Semenzato M., Grespi F., Ross-Cisneros F., Carelli V., Sadun A., Tavernarakis N. and Scorrano L. Inhibition of autophagy curtails visual loss in a model of autosomal dominant optic atrophy. Nature Communications, 2020
  9. Lou G.*, Palikaras K.*, Lautrup S.*, Schneibye-Knudsen M., Tavernarakis N. and Fang E.F. Mitophagy and neuroprotection. Trends in Molecular Medicine, 2019 *equal contribution
  10. Fang EF.*, Hou Y.*, Palikaras K.*, Adriaanse BA., Kerr JS., Yang B., Lautrup S., Hasan-Olive M., Caponio D., Dan X., Rocktäschel P., Croteau DL., Akbari M., Greig NH., Fladby T., Nilsen H., Cader MZ., Mattson MP., Tavernarakis N., Bohr VA. Mitophagy inhibits amyloid-β and tau pathology and reverses cognitive deficits in models of Alzheimer’s disease. Nature Neuroscience, 2019 *equal contribution
  11. Palikaras K., Lionaki E. and Tavernarakis N. Mechanisms of mitophagy in cellular homeostasis, physiology and pathology. Nature Cell Biology, 2018
  12. Palikaras K., Lionaki E. and Tavernarakis N. Coordination of mitophagy and mitochondrial biogenesis during ageing in C. elegans. Nature, 2015

Full publications list: Palikaras group

 

Funding